TERM: | 2020-21 Winter |
COURSE NUMBER: |
BIOL 478 |
COURSE TITLE: |
Environmental Modeling |
NAME OF INSTRUCTOR: |
Darcy Visscher |
CREDIT WEIGHT AND WEEKLY TIME DISTRIBUTION: |
credits 3(hrs lect 3 - hrs sem 0 - hrs lab 3) |
COURSE DESCRIPTION: |
An introduction to techniques and software programs used to model biological,
chemical, physical, or environmental phenomena. Laboratory work will be tailored
to students’ interests and needs.
Prerequisites: BIOL 391, MATH 200 |
COURSE MATERIALS: | There
is no mandatory textbook for the course but material are made available
to you on the course website, and these materials will be crucial to
your success. |
MARK DISTRIBUTION IN PERCENT: |
|
Midterm I |
15% |
Midterm II (noncumulative) |
20% |
Final Exam (cumulative) |
35% |
Participation | 5% |
Lab Assignments |
10% |
Lab Final Project |
15% |
|
|
|
100% |
|
COURSE OBJECTIVES: | Concepts:
- To demonstrate an understanding of the role of mathematics and modeling in modern biological research.
- Appreciate
the role of mathematics in the analysis of biological systems including
populations of molecules, cells and organisms.
- To develop
students' skills in algebraic manipulation, the calculus of
differential equations, mathematical modelling, and matrix algebra.
- To be able to assess biological inferences that rest on mathematical and statistical arguments.
Competencies:
- To develop skills in quanitative reasoning.
- To appreciate the importance of translating biological problems into mathematical formulation, and computer code.
- To develop skills in biological model creation, parameterization, validation, and simulation.
- To become competent in using the statistical program R for modeling.
|
COURSE OUTLINE: |
- Introduction to Modeling
- The Modeling Process
- Qualitative Model Formulation
- Quantitative Model Formulation
- Numerical Techniques
- Model parameterization and validation
- Analyzing models
- Applications: structured populations
- Applications: competition and predation
- Applications: infectious disease
- Applications: models in space
- Applications: individual based models
|
LAB OUTLINE: |
- Introduction
- Population growth
- Annual plant
- Predator-prey
- Infectious diseases
- Individual based models
- Modeling Projects
|